Overlays

Colored boxes to help in the visualization of samples and variables

overlayFont font Private
Font for the overlays in one dimensional plots
Default:
Color for the overlays in one dimensional plots
Default: rgb(0,0,0)
overlayFontSize integer
Font size for the overlays in one dimensional plots
Default: 6
Font style for the overlays. @default
Default:
Options: , bold, italic, bold italic
Scaling factor used to increse or decrease overlays font size in the canvas in one dimensional plots
Default: 1
Length in pixels of the thickness for the colored boxes to classify samples and or variables in one dimensional plots
Default: 30
Flag to indicate to show or not the level overlays in one dimensional plots
Default: true
showOverlays boolean
Flag to indicate to show or not the overlays in one dimensional plots
Default: true
Object to assign properties to the variable overlays. The key should be an annotation in the 'data.z' object and the value may contain 'type' which could be either one of the one dimensional graph types or increasing, or decreasing for continuous annotations; 'color' to assign the color for the bar, line, etc.; 'level' which is an object where the key is the level and the value is the corresponding color. 'height' to identify how tall the overlay will be
Default: {}
Flag to indicate to recycle sample overlay colors with each overlay
Default: false
smpOverlays array
Sample annotations included in the 'data.x' object used in one dimensional plots
Default: []
Object to assign properties to the variable overlays. The key should be an annotation in the 'data.z' object and the value should be either type which could be either one of the one dimensional graph types or increasing, or decreasing for continuous annotations
Default: {}
Flag to indicate to recycle variable overlay colors with each overlay
Default: false
varOverlays array
Variable annotations included in the 'data.z' object used in one dimensional plots
Default: []